Protein ZmC3H3
ZmC3H3 is a protein in the C3H family.
Information
TF Name: ZmC3H3
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H3
Uniprot ID: K7UN27
Subgenome: 1

Protein ZmC3H3

ZmC3H3 is a protein in the C3H family.

Overview of domains present in v5 transcripts
PF00642PF18044PF18345
Zm00001eb296640_T002
Zm00001eb296640_T003
Zm00001eb296640_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d039101DAPseq no logo sequence fimo position
Zm00001d039101DAPseq no logo sequence fimo position
Zm00001d039101ChIPseq no logo sequence fimo position
Zm00001d039101PChIPseq no logo sequence fimo position

Interactions where ZmC3H3 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H3 is the target  
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There are 155 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb296640_T002 from maize genome v5

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00642
PF18345
PF18044
PF00642
PF18044
PF18345
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Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

GRMZM2G149347_T01 from maize genome v3


Related TFome: pUT4710

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSRVLVGMEGGVKEEEKLNGGLQFEVYN
QGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

GRMZM2G149347_T02 from maize genome v3

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

Zm00001d039101_T001 from maize genome v4

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSQRVLVGMEGGVKEEEKLNGGLQFEVY
NQGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

Zm00001eb296640_T001 from maize genome v5

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSVRSTTNPSPLPRCRDRVQFSIIQSMT
LTYSSVVLTVAMQTAARVSGHGRRSEGGGEAQRRAAVRGVQPGHAEDRALQQVGGDRHVPVR

Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

Zm00001eb296640_T003 from maize genome v5

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSRVLVGMEGGVKEEEKLNGGLQFEVYN
QGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Nucleotide Sequence
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ATTCATCAACGCAGCGCGGCGCCTA...

Zm00001eb296640_T004 from maize genome v5

Amino Acid Sequence
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MEVVLAPAQHDGLHAAFGPNPFDIGVGGDGRFSSSLSSLGGDRFCGYSTTASLFVNSPGLSSPSPRADSLSRGSSDSGSV
VDDGDDAAATAASVAERRLRLARLALQYQEVVNRFELCLSYLADAINEAAALRQENDELRVANEYLARRINVVGGRLADE
FSGLRLAEEHTTPPPLSPLPAAPVMPKSISVRSPGYLKMVQNGKHRASKPTKGSRVLVGMEGGVKEEEKLNGGLQFEVYN
QGMLKTELCNKWEETGTCPYGNQCQFAHGIAELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHSITPADLFLPRP

Nucleotide Sequence
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GGCGCCTACCGCTCAAACTCCCTAT...


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